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Language Skills

R
Python
Bash

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The source code is available on github.com/nstrayer/cv.

Last updated on 2022-12-26.

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James Cranley

My clinical interest lies at the intersect of inherited cardiac conditions and electrophysiology. During my research I have created a cell atlas of the human heart.

Education

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Oxford University

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Eton College

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Wellcome Trust Doctoral Fellowship

Teichmann Lab

Sanger Institute

2024 - 2021

PG Certificate in Medical Education

Institute of Continuing Education

Cambridge University

2019 - 2018

NIHR Academic Clinical Fellowship

East of England deanery

Cambridge

2018 - 2015

Membership of the Royal College of Physicians (London)

Royal College of Physicians

RCP

2016 - 2015

Research Experience

PhD Fellowship

Teichmann Lab

Sanger Institute

2024 - 2021

  • Single cell and spatial transcriptomic analysis of the adult and developing human heart
  • 50% wet lab genomics (single-cell and spatial transcriptomic)
  • 50% bioinformatics (python, Bash, R)

Academic Clinical Fellow pt. 3

Munroe Lab

Queen Mary University of London

2018 - 2018

  • Genome-wide associattion study into ECG trait (PR interval) using UK biobank data

Academic Clinical Fellow pt. 2

MacRae Lab

Harvard University

2017 - 2017

  • Literature review and introduction to zebrafish model

Academic Clinical Fellow pt. 1

Huang Lab

Cambridge University

2016 - 2016

  • Patch clamping rodent cardiomyocytes in a model of metabolic syndrome.

Intercalated BSc

Herring Lab

Oxford University

2013 - 2012

  • Investigating the role of the neuropeptide Galanin in cardiac autonomics using a guinea pig Langendorff model

Industry Experience

Foundation training was in North West Thames, followed by Core Medical and Cardiology training in the East of England (run-through)

Specialty Training, Cardiology

East of England deanery

Royal Papworth Hospital, UK

current - 2017

  • ST6: Royal Papworth Hospital
  • ST5: Norfolk & Norwich Hospital
  • ST3 & ST4: Addenbrooke’s Hospital

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Core Medical Training

East of England deanery

Addenbrooke’s Hospital

2015 - 2015

  • Papworth Hospital: Cardiology
  • Hinchingbrooke Hospital: Respiratory
  • Addenbrooke’s Hospital: ICU

Foundation Training

NW Thames deanery

Charing Cross Hospital

2015 - 2013

  • Harefield Hospital: Cardiology
  • Hillingdon Hospital: A&E
  • Charing Cross Hospital: Acute Medicine

Medical Elective

New York

Mount Sinai Hospital

2013 - 2013




Teaching Experience

I like education…

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Selected Data Science Writing

I regularly blog about data science and visualization on my blog LiveFreeOrDichotomize.

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Selected Press (About)

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Selected Press (By)

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Selected Publications, Posters, and Talks

Building a software package in tandem with machine learning methods research can result in both more rigorous code and more rigorous research

ENAR 2020

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2020

  • Invited talk in Human Data Interaction section.
  • How and why building an R package can benefit methodological research

Stochastic Block Modeling in R, Statistically rigorous clustering with rigorous code

RStudio::conf 2020

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2020

  • Invited talk about new sbmR package.
  • Focus on how software development and methodological research can improve both benefit when done in tandem.

PheWAS-ME: A web-app for interactive exploration of multimorbidity patterns in PheWAS

Bioinformatics

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2020

  • Manuscript detailing application for the exploration of multimorbidity patterns in PheWAS analyses
  • See landing page for more information.

Charge Reductions Associated with Shortening Time to Recovery in Septic Shock

Chest

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2019 - 2019

  • Authored with Wesley H. Self, MD MPH; Dandan Liu, PhD; Stephan Russ, MD, MPH; Michael J. Ward, MD, PhD, MBA; Nathan I. Shapiro, MD, MPH; Todd W. Rice, MD, MSc; Matthew W. Semler, MD, MSc.

Multimorbidity Explorer | A shiny app for exploring EHR and biobank data

RStudio::conf 2019

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2019 - 2019

  • Contributed Poster. Authored with Yaomin Xu.

Taking a network view of EHR and Biobank data to find explainable multivariate patterns

Vanderbilt Biostatistics Seminar Series

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2019 - 2019

  • University wide seminar series.

Patient-specific risk factors independently influence survival in Myelodysplastic Syndromes in an unbiased review of EHR records

Under-Review (copy available upon request.)

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2019

  • Bayesian network analysis used to find novel subgroups of patients with Myelodysplastic Syndromes (MDS).
  • Analysis done using method built for my dissertation.

Patient specific comorbidities impact overall survival in myelofibrosis

Under-Review (copy available upon request.)

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2019

  • Bayesian network analysis used to find robust novel subgroups of patients with given genetic mutations.
  • Analysis done using method built for my dissertation.

R timelineViz: Visualizing the distribution of study events in longitudinal studies

Under-Review (copy available upon request.)

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2018 - 2018

  • Authored with Alex Sunderman of the Vanderbilt Department of Epidemiology.

Continuous Classification using Deep Neural Networks

Vanderbilt Biostatistics Qualification Exam

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2017 - 2017

  • Review of methods for classifying continuous data streams using neural networks
  • Successfully met qualifying examination standards

Asymmetric Linkage Disequilibrium: Tools for Dissecting Multiallelic LD

Journal of Human Immunology

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2015 - 2015

  • Authored with Richard Single, Vanja Paunic, Mark Albrecht, and Martin Maiers.

An Agent Based Model of Mysis Migration

International Association of Great Lakes Research Conference

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2015 - 2015

  • Authored with Brian O’Malley, Sture Hansson, and Jason Stockwell.

Declines of Mysis diluviana in the Great Lakes

Journal of Great Lakes Research

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2015 - 2015

  • Authored with Peter Euclide and Jason Stockwell.